On Leaf Powers

نویسنده

  • Andreas Brandstädt
چکیده

For an integer k, a tree T is a k-leaf root of a finite simple undirected graph G = (V,E) if the set of leaves of T is the vertex set V of G and for any two vertices x, y ∈ V , x 6= y, xy ∈ E if and only if the distance of x and y in T is at most k. Then graph G is a k-leaf power if it has a k-leaf root. G is a leaf power if it is a k-leaf power for some k. This notion was introduced and studied by Nishimura, Ragde and Thilikos; it has its background and motivation in computational biology and phylogeny. In this survey, we describe recent results on leaf powers, variants and generalizations. We discuss the relationship between leaf powers and strongly chordal graphs as well as fixed tolerance NeST graphs, describe some subclasses of leaf powers, give the complete inclusion structure of k-leaf power classes, and describe various characterizations of 3and 4-leaf powers, as well as of distance-hereditary 5-leaf powers. Finally we discuss two variants of the notion of k-leaf power such as (k, l)-leaf powers and exact leaf powers, and we generalize leaf powers (of trees) to simplicial powers of graphs. Most of the presented results are part of joint work, mostly with Van Bang Le and Peter Wagner, but also with Christian Hundt, Federico Mancini, R. Sritharan, and Dieter Rautenbach.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

On Strongly Chordal Graphs That Are Not Leaf Powers

A common task in phylogenetics is to find an evolutionary tree representing proximity relationships between species. This motivates the notion of leaf powers: a graph G = (V,E) is a leaf power if there exist a tree T on leafset V and a threshold k such that uv ∈ E if and only if the distance between u and v in T is at most k. Characterizing leaf powers is a challenging open problem, along with ...

متن کامل

A forbidden induced subgraph characterization of distance-hereditary 5-leaf powers

AgraphG is a k-leaf power if there is a tree T such that the vertices ofG are the leaves of T and two vertices are adjacent in G if and only if their distance in T is at most k. In this situation T is called a k-leaf root of G. Motivated by the search for underlying phylogenetic trees, the notion of a k-leaf power was introduced and studied by Nishimura, Ragde and Thilikos and subsequently in v...

متن کامل

Simplicial Powers of Graphs

In a graph, a vertex is simplicial if its neighborhood is a clique. For an integer k ≥ 1, a graph G = (VG, EG) is the k-simplicial power of a graph H = (VH , EH) (H a root graph of G) if VG is the set of all simplicial vertices of H , and for all distinct vertices x and y in VG, xy ∈ EG if and only if the distance inH between x and y is atmost k. This concept generalizes k-leaf powers introduce...

متن کامل

Strictly chordal graphs are leaf powers

A fundamental problem in computational biology is the phylogeny reconstruction for a set of specific organisms. One of the graph theoretical approaches is to construct a similarity graph on the set of organisms where adjacency indicates evolutionary closeness, and then to reconstruct a phylogeny by computing a tree interconnecting the organisms such that leaves in the tree are labeled by the or...

متن کامل

2 4 Se p 20 09 Note on the 4 - and 5 - leaf powers ∗

Motivated by the problem of reconstructing evolutionary history, Nishimura et al. defined k-leaf powers as the class of graphs G = (V,E) which has a k-leaf root T , i.e., T is a tree such that the vertices of G are exactly the leaves of T and two vertices in V are adjacent in G if and only if their distance in T is at most k. It is known that leaf powers are chordal graphs. Brandstädt and Le pr...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2009